MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus lentus
3_3BalbC2O2_S3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 274
bases: 2,889,488 bps
CDS: 2,757
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 55
misc RNA:
Total features: 2,819
Total number of protein coding genes annotated/found:
2,757
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5053|JADGLT010000111.1
SEQF5053_01000
Genome Viewer
NA
AA
1263/421
1343-81
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase
SEQF5053|JADGLT010000111.1
SEQF5053_01001
Genome Viewer
NA
AA
1620/540
3056-1437
Oligopeptide-binding protein OppA
SEQF5053|JADGLT010000111.1
SEQF5053_01002
Genome Viewer
NA
AA
717/239
3461-4177
HTH-type transcriptional repressor NagR
SEQF5053|JADGLT010000111.1
SEQF5053_01003
Genome Viewer
NA
AA
1110/370
4240-5349
Putative D-galactosamine-6-phosphate deaminase AgaS
SEQF5053|JADGLT010000111.1
SEQF5053_01004
Genome Viewer
NA
AA
936/312
5362-6297
Tagatose-6-phosphate kinase
SEQF5053|JADGLT010000111.1
SEQF5053_01005
Genome Viewer
NA
AA
945/315
6298-7242
Tagatose 1%2C6-diphosphate aldolase
SEQF5053|JADGLT010000111.1
SEQF5053_01006
Genome Viewer
NA
AA
1785/595
7265-9049
Beta-galactosidase
SEQF5053|JADGLT010000111.1
SEQF5053_01007
Genome Viewer
NA
AA
480/160
9078-9557
PTS system mannose-specific EIIAB component
SEQF5053|JADGLT010000111.1
SEQF5053_01008
Genome Viewer
NA
AA
888/296
9575-10462
hypothetical protein
SEQF5053|JADGLT010000111.1
SEQF5053_01009
Genome Viewer
NA
AA
858/286
10449-11306
PTS system mannose-specific EIID component
SEQF5053|JADGLT010000111.1
SEQF5053_01010
Genome Viewer
NA
AA
402/134
11333-11734
hypothetical protein
SEQF5053|JADGLT010000111.1
SEQF5053_01011
Genome Viewer
NA
AA
399/133
11785-12183
hypothetical protein
SEQF5053|JADGLT010000111.1
SEQF5053_01012
Genome Viewer
NA
AA
1026/342
12350-13375
Formate dehydrogenase
SEQF5053|JADGLT010000111.1
SEQF5053_01013
Genome Viewer
NA
AA
168/56
13519-13686
hypothetical protein
SEQF5053|JADGLT010000111.1
SEQF5053_01014
Genome Viewer
NA
AA
93/31
13683-13775
hypothetical protein
SEQF5053|JADGLT010000111.1
SEQF5053_01015
Genome Viewer
NA
AA
693/231
14532-15224
putative ABC transporter ATP-binding protein YknY
SEQF5053|JADGLT010000111.1
SEQF5053_01016
Genome Viewer
NA
AA
1164/388
15211-16374
hypothetical protein
SEQF5053|JADGLT010000111.1
SEQF5053_01017
Genome Viewer
NA
AA
408/136
16427-16834
hypothetical protein
SEQF5053|JADGLT010000111.1
SEQF5053_01018
Genome Viewer
NA
AA
726/242
17061-17786
hypothetical protein
SEQF5053|JADGLT010000111.1
SEQF5053_01019
Genome Viewer
NA
AA
1077/359
17967-19043
Putative aminopeptidase YsdC
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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